STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGV32711.1KEGG: avn:Avin_39060 hypothetical protein. (213 aa)    
Predicted Functional Partners:
EGV32710.1
KEGG: avn:Avin_39070 hypothetical protein.
 
    0.959
EGV32712.1
KEGG: avn:Avin_39050 hypothetical protein.
 
     0.952
EGV32713.1
KEGG: avn:Avin_39040 hypothetical protein.
       0.777
EGV33159.1
PFAM: Carbohydrate-selective porin OprB; KEGG: tin:Tint_2177 carbohydrate-selective porin OprB.
  
     0.517
EGV29595.1
Relaxase; KEGG: pmr:PMI2476 plasmid conjugative relaxase; PFAM: Protein of unknown function, putative helicase/relaxase; SMART: Metal-dependent phosphohydrolase, HD region.
  
     0.507
EGV32709.1
TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: dat:HRM2_38790 GGDEF domain family protein; SMART: Diguanylate cyclase, predicted.
       0.504
EGV29617.1
PFAM: Type-F conjugative transfer system pilin assembly protein TrbC; KEGG: see:SNSL254_p_0098 type IV conjugative transfer system protein TraW.
  
     0.501
EGV32697.1
Relaxase; KEGG: pmr:PMI2476 plasmid conjugative relaxase; PFAM: Protein of unknown function, putative helicase/relaxase; SMART: Metal-dependent phosphohydrolase, HD region.
  
     0.498
EGV32683.1
PFAM: Type-F conjugative transfer system pilin assembly protein TrbC; KEGG: see:SNSL254_p_0098 type IV conjugative transfer system protein TraW.
  
     0.487
EGV32860.1
KEGG: aha:AHA_0693 putative type IV pilin.
  
     0.484
Your Current Organism:
Thiorhodococcus drewsii
NCBI taxonomy Id: 765913
Other names: T. drewsii AZ1, Thiorhodococcus drewsii AZ1, Thiorhodococcus drewsii DSM 15006, Thiorhodococcus drewsii str. AZ1, Thiorhodococcus drewsii strain AZ1
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