STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGV32429.1PFAM: Protein of unknown function DUF403, bacteria; KEGG: alv:Alvin_0464 hypothetical protein. (320 aa)    
Predicted Functional Partners:
EGV31800.1
KEGG: alv:Alvin_0543 transglutaminase domain-containing protein; PFAM: Bacterial transglutaminase-like, N-terminal; Transglutaminase-like; SMART: Transglutaminase-like.
  
 0.982
EGV32428.1
PFAM: Protein of unknown function DUF404, bacteria N-terminal; Protein of unknown function DUF407; KEGG: alv:Alvin_0463 hypothetical protein.
  
 0.970
EGV31886.1
PFAM: Protein of unknown function DUF404, bacteria N-terminal; Protein of unknown function DUF407; KEGG: alv:Alvin_0508 hypothetical protein.
  
 0.924
EGV31888.1
KEGG: glo:Glov_0645 transglutaminase domain protein; PFAM: Transglutaminase-like; Bacterial transglutaminase-like, N-terminal; SMART: Transglutaminase-like.
  
 0.869
EGV33760.1
Transglutaminase domain-containing protein; KEGG: scl:sce0813 transglutaminase-like enzymes, putative cysteine proteases; PFAM: Transglutaminase-like; SMART: Transglutaminase-like.
 
  
 0.777
EGV29926.1
KEGG: alv:Alvin_0307 hypothetical protein; PFAM: Protein of unknown function DUF2126; Bacterial transglutaminase-like, N-terminal; Transglutaminase-like; SMART: Transglutaminase-like.
 
  
 0.734
EGV31801.1
PFAM: Protein of unknown function DUF404, bacteria N-terminal; Protein of unknown function DUF407; Protein of unknown function DUF403, bacteria; KEGG: alv:Alvin_0544 hypothetical protein.
 
  
0.721
EGV30633.1
Protein of unknown function UCP012641; PFAM: Uncharacterised conserved protein UCP012641; KEGG: gdj:Gdia_2247 hypothetical protein.
 
     0.424
Your Current Organism:
Thiorhodococcus drewsii
NCBI taxonomy Id: 765913
Other names: T. drewsii AZ1, Thiorhodococcus drewsii AZ1, Thiorhodococcus drewsii DSM 15006, Thiorhodococcus drewsii str. AZ1, Thiorhodococcus drewsii strain AZ1
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