STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGV32499.1KEGG: app:CAP2UW1_2168 protein of unknown function DUF1555. (236 aa)    
Predicted Functional Partners:
EGV31977.1
KEGG: alv:Alvin_1454 hypothetical protein.
   
 0.956
EGV29707.1
KEGG: alv:Alvin_1395 cytochrome c family protein.
   
 0.956
EGV33995.1
KEGG: sse:Ssed_3637 hypothetical protein; PFAM: Peptidase S1/S6, chymotrypsin/Hap; SMART: Peptidase S1/S6, chymotrypsin/Hap.
  
 
 0.910
secY
Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.
    
 
 0.910
EGV33987.1
KEGG: nwa:Nwat_2386 hypothetical protein.
  
 0.909
EGV33571.1
KEGG: rsl:RPSI07_mp0245 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02677; PFAM: Conserved hypothetical protein CHP02677.
  
 0.909
EGV33016.1
FG-GAP repeat protein; PFAM: FG-GAP; KEGG: cch:Cag_0738 VCBS.
  
 0.909
EGV32502.1
KEGG: afw:Anae109_3722 hypothetical protein.
  
 0.909
EGV31924.1
PFAM: Peptidoglycan-binding lysin domain; KEGG: sil:SPO0570 hypothetical protein.
  
 0.909
EGV31280.1
YD repeat-containing protein; PFAM: YD repeat; Thrombospondin, type 3-like repeat; KEGG: ota:Ot19g00070 quinoprotein (ISS).
  
 0.909
Your Current Organism:
Thiorhodococcus drewsii
NCBI taxonomy Id: 765913
Other names: T. drewsii AZ1, Thiorhodococcus drewsii AZ1, Thiorhodococcus drewsii DSM 15006, Thiorhodococcus drewsii str. AZ1, Thiorhodococcus drewsii strain AZ1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.