STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGV31967.1KEGG: mag:amb3955 exopolyphosphatase-like protein. (309 aa)    
Predicted Functional Partners:
rbfA
Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.
  
  
 0.846
cysN
Sulfate adenylyltransferase subunit 1; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
   
 
  0.832
EGV32918.1
Carboxyl-terminal protease; SMART: Peptidase S41; PDZ/DHR/GLGF; TIGRFAM: Peptidase S41A, C-terminal protease; KEGG: alv:Alvin_0799 carboxyl-terminal protease; PFAM: Peptidase S41; PDZ/DHR/GLGF; Belongs to the peptidase S41A family.
   
   0.655
EGV32255.1
Peptidase S41; KEGG: cyc:PCC7424_4807 peptidase S41; PFAM: Peptidase S41; SMART: Peptidase S41; PDZ/DHR/GLGF.
   
   0.655
EGV31306.1
TIGRFAM: Peptidase S41A, C-terminal protease; PFAM: Peptidase S41; PDZ/DHR/GLGF; KEGG: alv:Alvin_3025 carboxyl-terminal protease; SMART: Peptidase S41; PDZ/DHR/GLGF; Belongs to the peptidase S41A family.
   
   0.655
sat
PFAM: Sulphate adenylyltransferase; TIGRFAM: Sulphate adenylyltransferase; HAMAP: Sulphate adenylyltransferase, subgroup; KEGG: alv:Alvin_1118 sulfate adenylyltransferase; Belongs to the sulfate adenylyltransferase family.
    
  0.573
EGV32608.1
Hypothetical protein; KEGG: meh:M301_1509 ribonuclease, Rne/Rng family.
  
  
 0.554
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
  
  
 0.554
EGV30089.1
KEGG: alv:Alvin_1678 hypothetical protein.
  
  
 0.554
EGV30300.1
KEGG: alv:Alvin_1281 hypothetical protein.
    
 0.552
Your Current Organism:
Thiorhodococcus drewsii
NCBI taxonomy Id: 765913
Other names: T. drewsii AZ1, Thiorhodococcus drewsii AZ1, Thiorhodococcus drewsii DSM 15006, Thiorhodococcus drewsii str. AZ1, Thiorhodococcus drewsii strain AZ1
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