STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGV31798.1PFAM: Protein of unknown function DUF2279, periplasmic lipoprotein; KEGG: alv:Alvin_0528 hypothetical protein. (417 aa)    
Predicted Functional Partners:
EGV33421.1
TIGRFAM: putative PEP-CTERM/exosortase system-associated acyltransferase; KEGG: cps:CPS_0524 hypothetical protein.
  
     0.712
EGV31318.1
PFAM: General secretion pathway protein M; KEGG: alv:Alvin_3008 general secretion pathway protein M.
  
     0.685
EGV33192.1
KEGG: alv:Alvin_0686 hypothetical protein.
  
     0.665
EGV31315.1
KEGG: alv:Alvin_3011 general secretion pathway protein J.
  
     0.581
EGV31799.1
KEGG: tgr:Tgr7_0126 transferase hexapeptide repeat containing protein.
       0.547
EGV32048.1
PFAM: Conserved hypothetical protein CHP00730; KEGG: alv:Alvin_0152 hypothetical protein.
  
     0.545
EGV32903.1
KEGG: nhl:Nhal_3197 hypothetical protein.
  
     0.521
EGV27639.1
Sugar transferase, PEP-CTERM/EpsH1 system associated; TIGRFAM: Sugar transferase, PEP-CTERM, Stp1; KEGG: net:Neut_0898 glycosyl transferase, group 1.
  
     0.487
EGV31618.1
KEGG: alv:Alvin_1307 hypothetical protein.
  
     0.477
EGV33610.1
High potential iron-sulfur protein; Specific class of high-redox-potential 4Fe-4S ferredoxins. Functions in anaerobic electron transport in most purple and in some other photosynthetic bacteria and in at least one genus (Paracoccus) of halophilic, denitrifying bacteria; Belongs to the high-potential iron-sulfur protein (HiPIP) family.
  
     0.473
Your Current Organism:
Thiorhodococcus drewsii
NCBI taxonomy Id: 765913
Other names: T. drewsii AZ1, Thiorhodococcus drewsii AZ1, Thiorhodococcus drewsii DSM 15006, Thiorhodococcus drewsii str. AZ1, Thiorhodococcus drewsii strain AZ1
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