STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGV31919.1KEGG: alv:Alvin_1116 hypothetical protein. (203 aa)    
Predicted Functional Partners:
EGV31920.1
TfoX domain-containing protein; PFAM: TfoX, N-terminal; KEGG: gvi:glr2678 hypothetical protein.
       0.697
EGV31918.1
KEGG: gur:Gura_3033 hypothetical protein.
       0.596
EGV28583.1
Membrane-flanked domain DUF304; PFAM: Protein of unknown function DUF304, prokaryotic transmembrane adjacent region; KEGG: alv:Alvin_1861 membrane-flanked domain-containing protein.
  
     0.519
EGV32804.1
KEGG: alv:Alvin_1502 PilT domain-containing protein.
  
     0.480
EGV28292.1
KEGG: alv:Alvin_1609 hypothetical protein.
  
     0.480
EGV32445.1
KEGG: alv:Alvin_0298 hypothetical protein.
  
     0.470
EGV31788.1
KEGG: alv:Alvin_0519 sporulation domain-containing protein.
  
     0.470
EGV33983.1
LmbE family protein; PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; Glycosyl transferase, family 2; KEGG: mca:MCA2558 glycosyl transferase, group 2 family protein.
  
     0.455
EGV33194.1
KEGG: alv:Alvin_0684 hypothetical protein.
  
     0.450
EGV32392.1
KEGG: alv:Alvin_1914 heat shock protein DnaJ domain-containing protein; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal.
  
     0.429
Your Current Organism:
Thiorhodococcus drewsii
NCBI taxonomy Id: 765913
Other names: T. drewsii AZ1, Thiorhodococcus drewsii AZ1, Thiorhodococcus drewsii DSM 15006, Thiorhodococcus drewsii str. AZ1, Thiorhodococcus drewsii strain AZ1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.