STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGV31618.1KEGG: alv:Alvin_1307 hypothetical protein. (190 aa)    
Predicted Functional Partners:
EGV33610.1
High potential iron-sulfur protein; Specific class of high-redox-potential 4Fe-4S ferredoxins. Functions in anaerobic electron transport in most purple and in some other photosynthetic bacteria and in at least one genus (Paracoccus) of halophilic, denitrifying bacteria; Belongs to the high-potential iron-sulfur protein (HiPIP) family.
  
     0.733
EGV33981.1
KEGG: alv:Alvin_2719 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR2; SEC-C motif; SMART: Tetratricopeptide repeat.
  
     0.706
EGV31315.1
KEGG: alv:Alvin_3011 general secretion pathway protein J.
  
     0.685
EGV31318.1
PFAM: General secretion pathway protein M; KEGG: alv:Alvin_3008 general secretion pathway protein M.
  
     0.644
EGV28239.1
KEGG: alv:Alvin_1831 hypothetical protein.
  
     0.619
EGV32808.1
KEGG: alv:Alvin_0730 hypothetical protein.
  
     0.598
EGV31977.1
KEGG: alv:Alvin_1454 hypothetical protein.
  
     0.580
EGV28573.1
PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; PAS fold; PAS fold-4; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; KEGG: alv:Alvin_0639 multi-sensor signal transduction histidine kinase; SMART: ATP-binding region, ATPase-like; PAS; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region.
  
     0.580
EGV33026.1
PFAM: Membrane protein, aromatic hydrocarbon degradation; KEGG: alv:Alvin_1746 aromatic hydrocarbon degradation membrane protein.
  
     0.570
EGV31317.1
PFAM: Fimbrial assembly; KEGG: alv:Alvin_3009 fimbrial assembly family protein.
  
     0.559
Your Current Organism:
Thiorhodococcus drewsii
NCBI taxonomy Id: 765913
Other names: T. drewsii AZ1, Thiorhodococcus drewsii AZ1, Thiorhodococcus drewsii DSM 15006, Thiorhodococcus drewsii str. AZ1, Thiorhodococcus drewsii strain AZ1
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