STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGV30827.1KEGG: dde:Dde_3305 choline/carnitine/betaine transport; TIGRFAM: BCCT transporter; PFAM: BCCT transporter; Belongs to the BCCT transporter (TC 2.A.15) family. (589 aa)    
Predicted Functional Partners:
EGV30826.1
PFAM: ABC-type glycine betaine transport system, substrate-binding region; KEGG: drt:Dret_1056 substrate-binding region of ABC-type glycine betaine transport system.
     
 0.795
EGV30825.1
PFAM: Peptidase S1/S6, chymotrypsin/Hap; KEGG: dde:Dde_3307 hypothetical protein.
       0.682
EGV30635.1
PFAM: ABC-type glycine betaine transport system, substrate-binding region; Binding-protein-dependent transport systems inner membrane component; KEGG: acp:A2cp1_3373 substrate-binding region of ABC-type glycine betaine transport system.
     
 0.413
Your Current Organism:
Thiorhodococcus drewsii
NCBI taxonomy Id: 765913
Other names: T. drewsii AZ1, Thiorhodococcus drewsii AZ1, Thiorhodococcus drewsii DSM 15006, Thiorhodococcus drewsii str. AZ1, Thiorhodococcus drewsii strain AZ1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.