STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alaSalanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. (867 aa)    
Predicted Functional Partners:
EGV31371.1
KEGG: alv:Alvin_0755 hypothetical protein.
    
 0.992
EGV32669.1
WD40 repeat-containing protein; PFAM: WD40 repeat, subgroup; KEGG: app:CAP2UW1_2609 WD-40 repeat protein.
  
 0.985
EGV28036.1
KEGG: fal:FRAAL5563 WD-40 repeat-containing protein; PFAM: WD40 repeat, subgroup; Pentapeptide repeat; Nucleoside phosphorylase; SMART: WD40 repeat.
  
 0.985
EGV33980.1
WD40 repeat-containing protein; PFAM: WD40 repeat, subgroup; KEGG: gob:Gobs_3451 WD40 repeat, subgroup.
   
 0.984
EGV30487.1
KEGG: alv:Alvin_2950 hypothetical protein.
   
 0.984
EGV27679.1
KEGG: amr:AM1_4989 WD repeat-containing protein.
   
 0.984
EGV31831.1
KEGG: alv:Alvin_2384 TPR repeat-containing protein.
   
 0.966
EGV34095.1
PFAM: Tetratricopeptide TPR-1; KEGG: cyj:Cyan7822_1089 TPR repeat-containing protein.
   
 0.963
EGV33436.1
PFAM: Tetratricopeptide TPR-1; KEGG: cph:Cpha266_0297 TPR repeat-containing protein.
   
 0.963
EGV30356.1
PFAM: Methyltransferase type 12; Tetratricopeptide TPR2; Tetratricopeptide TPR-4; Tetratricopeptide TPR-1; KEGG: azo:azo3907 hypothetical protein.
   
 0.963
Your Current Organism:
Thiorhodococcus drewsii
NCBI taxonomy Id: 765913
Other names: T. drewsii AZ1, Thiorhodococcus drewsii AZ1, Thiorhodococcus drewsii DSM 15006, Thiorhodococcus drewsii str. AZ1, Thiorhodococcus drewsii strain AZ1
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