STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGV30143.1KEGG: alv:Alvin_2501 cyd operon protein YbgT; TIGRFAM: Cyd operon protein YbgT; PFAM: Membrane bound YbgT-like. (41 aa)    
Predicted Functional Partners:
EGV30142.1
KEGG: alv:Alvin_2500 cytochrome d ubiquinol oxidase subunit II; TIGRFAM: Cytochrome bd ubiquinol oxidase, subunit II; PFAM: Cytochrome bd ubiquinol oxidase, subunit II.
  
 0.998
EGV30141.1
PFAM: Cytochrome bd ubiquinol oxidase, subunit I; KEGG: alv:Alvin_2499 cytochrome bd ubiquinol oxidase subunit I.
  
 
 0.969
EGV33285.1
TIGRFAM: Succinate dehydrogenase/fumarate reductase iron-sulphur protein; KEGG: sth:STH3174 succinate dehydrogenase iron-sulfur subunit; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup.
     
  0.499
EGV33286.1
TIGRFAM: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit, low-GC Gram-positive bacteria; KEGG: gym:GYMC10_5438 succinate dehydrogenase flavoprotein subunit; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal.
     
  0.499
EGV33287.1
TIGRFAM: Succinate dehydrogenase, cytochrome b558 subunit; KEGG: dsy:DSY0735 fumarate reductase cytochrome b subunit.
     
  0.499
EGV30030.1
KEGG: alv:Alvin_1653 succinate dehydrogenase and fumarate reductase iron-sulfur protein; TIGRFAM: Succinate dehydrogenase/fumarate reductase iron-sulphur protein.
     
  0.499
EGV30031.1
TIGRFAM: Succinate dehydrogenase, flavoprotein subunit; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; KEGG: alv:Alvin_1961 succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
     
  0.499
EGV30033.1
KEGG: alv:Alvin_1963 succinate dehydrogenase, cytochrome b556 subunit; TIGRFAM: Succinate dehydrogenase, cytochrome b556 subunit; PFAM: Succinate dehydrogenase, cytochrome b subunit.
     
  0.499
Your Current Organism:
Thiorhodococcus drewsii
NCBI taxonomy Id: 765913
Other names: T. drewsii AZ1, Thiorhodococcus drewsii AZ1, Thiorhodococcus drewsii DSM 15006, Thiorhodococcus drewsii str. AZ1, Thiorhodococcus drewsii strain AZ1
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