STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGV28679.1KEGG: alv:Alvin_1231 hypothetical protein. (128 aa)    
Predicted Functional Partners:
EGV28678.1
KEGG: alv:Alvin_1231 hypothetical protein.
      0.976
EGV30568.1
Arylesterase; KEGG: alv:Alvin_1194 arylesterase; PFAM: Lipase, GDSL.
  
 0.919
EGV28273.1
KEGG: htu:Htur_2279 hypothetical protein.
  
 0.919
EGV28541.1
GSCFA domain protein; PFAM: GSCFA; KEGG: syd:Syncc9605_2481 hypothetical protein.
   
 0.896
EGV28040.1
KEGG: syn:slr0386 hypothetical protein.
   
 0.896
EGV28680.1
PFAM: GTP-binding protein, HSR1-related; KEGG: alv:Alvin_1232 GTP-binding protein HSR1-like protein.
     
 0.798
EGV30533.1
KEGG: alv:Alvin_0670 flagellar basal-body rod protein FlgG; TIGRFAM: Flagellar basal-body rod FlgG; Fagellar hook-basal body protein, FlgE/F/G; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal; Belongs to the flagella basal body rod proteins family.
    
   0.786
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
  0.764
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.745
EGV30059.1
PFAM: Glycosyltransferase 36; Putative carbohydrate binding; Glycosyltransferase 36 associated; KEGG: alv:Alvin_1155 glycosyltransferase 36.
     
 0.739
Your Current Organism:
Thiorhodococcus drewsii
NCBI taxonomy Id: 765913
Other names: T. drewsii AZ1, Thiorhodococcus drewsii AZ1, Thiorhodococcus drewsii DSM 15006, Thiorhodococcus drewsii str. AZ1, Thiorhodococcus drewsii strain AZ1
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