STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGV28582.1KEGG: alv:Alvin_1860 hypothetical protein. (99 aa)    
Predicted Functional Partners:
EGV28583.1
Membrane-flanked domain DUF304; PFAM: Protein of unknown function DUF304, prokaryotic transmembrane adjacent region; KEGG: alv:Alvin_1861 membrane-flanked domain-containing protein.
       0.773
EGV28584.1
AAA-4 family protein; PFAM: ATPase associated with various cellular activities, AAA-4; KEGG: caa:Caka_0849 putative transcriptional regulator.
       0.488
Your Current Organism:
Thiorhodococcus drewsii
NCBI taxonomy Id: 765913
Other names: T. drewsii AZ1, Thiorhodococcus drewsii AZ1, Thiorhodococcus drewsii DSM 15006, Thiorhodococcus drewsii str. AZ1, Thiorhodococcus drewsii strain AZ1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.