STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGV28270.1KEGG: alv:Alvin_1300 hypothetical protein. (95 aa)    
Predicted Functional Partners:
EGV28268.1
PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; Ferredoxin; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: alv:Alvin_1866 NADH:ubiquinone oxidoreductase subunit G.
       0.645
EGV28269.1
Hydrogen dehydrogenase; KEGG: alv:Alvin_1867 NADH ubiquinone oxidoreductase 20 kDa subunit; PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit.
       0.642
EGV28272.1
KEGG: alv:Alvin_1869 hydrogenase maturation protease; TIGRFAM: Peptidase A31, hydrogen uptake protein; PFAM: Peptidase A31, hydrogen uptake protein.
       0.619
EGV28271.1
Hydrogen dehydrogenase; KEGG: alv:Alvin_1868 nickel-dependent hydrogenase large subunit; PFAM: Nickel-dependent hydrogenase, large subunit.
       0.601
EGV28267.1
KEGG: alv:Alvin_1865 NADH dehydrogenase (quinone); PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding.
       0.500
EGV28266.1
PFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit; KEGG: alv:Alvin_1864 NADH dehydrogenase (ubiquinone) 24 kDa subunit.
       0.480
Your Current Organism:
Thiorhodococcus drewsii
NCBI taxonomy Id: 765913
Other names: T. drewsii AZ1, Thiorhodococcus drewsii AZ1, Thiorhodococcus drewsii DSM 15006, Thiorhodococcus drewsii str. AZ1, Thiorhodococcus drewsii strain AZ1
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