STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGV27852.1KEGG: amr:AM1_5006 IS4 family transposase. (122 aa)    
Predicted Functional Partners:
EGV28514.1
Transposase; KEGG: ana:all8065 transposase.
 
     0.918
EGV27494.1
PFAM: Transposase, IS4-like; KEGG: amr:AM1_5147 IS4 family transposase.
 
     0.903
EGV28511.1
PFAM: Transposase, IS4-like; KEGG: ana:all8065 transposase.
 
     0.898
EGV27992.1
KEGG: cyc:PCC7424_5670 transposase ISAs1 family protein.
 
     0.783
EGV27528.1
Transposase; KEGG: amc:MADE_01923 transposase.
  
     0.774
EGV27853.1
SMART: ATPase, AAA+ type, core; TIGRFAM: ATPase, type I secretion system, PrtD; KEGG: alv:Alvin_0236 type I secretion system ATPase; PFAM: ABC transporter-like.
       0.441
Your Current Organism:
Thiorhodococcus drewsii
NCBI taxonomy Id: 765913
Other names: T. drewsii AZ1, Thiorhodococcus drewsii AZ1, Thiorhodococcus drewsii DSM 15006, Thiorhodococcus drewsii str. AZ1, Thiorhodococcus drewsii strain AZ1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.