STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGV27680.1KEGG: tbd:Tbd_1486 hypothetical protein. (259 aa)    
Predicted Functional Partners:
EGV27681.1
PFAM: Glycosyl transferase, family 2; KEGG: hch:HCH_04688 cell wall biosynthesis glycosyltransferase.
       0.773
EGV27682.1
TIGRFAM: Hydrolase, ortholog 1, exosortase system type 1 associated; PFAM: Protein-tyrosine phosphatase, low molecular weight; ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type; KEGG: alv:Alvin_1808 hydrolase-like 1, exosortase system type 1 associated; SMART: Protein-tyrosine phosphatase, low molecular weight.
       0.559
EGV27683.1
Xenobiotic-transporting ATPase; PFAM: ABC transporter-like; ABC transporter, transmembrane region; KEGG: tkm:TK90_2527 ABC transporter related protein; SMART: ATPase, AAA+ type, core.
       0.422
Your Current Organism:
Thiorhodococcus drewsii
NCBI taxonomy Id: 765913
Other names: T. drewsii AZ1, Thiorhodococcus drewsii AZ1, Thiorhodococcus drewsii DSM 15006, Thiorhodococcus drewsii str. AZ1, Thiorhodococcus drewsii strain AZ1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.