STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGV27572.1KEGG: aeh:Mlg_2336 hypothetical protein. (164 aa)    
Predicted Functional Partners:
EGV27766.1
PFAM: Integrase, catalytic core; KEGG: aeh:Mlg_2337 integrase catalytic subunit.
     0.785
EGV27685.1
Hypothetical protein; KEGG: bpt:Bpet4601 putative transposase.
 
     0.785
EGV27585.1
KEGG: rsq:Rsph17025_4007 hypothetical protein.
 
     0.785
EGV27535.1
PFAM: Integrase, catalytic core; KEGG: gur:Gura_3821 integrase catalytic subunit.
 
     0.785
EGV27734.1
KEGG: drt:Dret_2536 integrase catalytic region.
 
     0.784
EGV27747.1
PFAM: Integrase, catalytic core; KEGG: bpt:Bpet4601 putative transposase.
     0.784
EGV27484.1
PFAM: Integrase, catalytic core; KEGG: rsq:Rsph17025_3832 hypothetical protein.
     0.784
EGV27606.1
PFAM: Integrase, catalytic core; KEGG: bpt:Bpet4601 putative transposase.
     0.783
EGV27571.1
PFAM: Polysaccharide deacetylase; KEGG: nmu:Nmul_A0301 polysaccharide deacetylase.
       0.462
Your Current Organism:
Thiorhodococcus drewsii
NCBI taxonomy Id: 765913
Other names: T. drewsii AZ1, Thiorhodococcus drewsii AZ1, Thiorhodococcus drewsii DSM 15006, Thiorhodococcus drewsii str. AZ1, Thiorhodococcus drewsii strain AZ1
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