STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGZ50547.1KEGG: tel:tlr0677 hypothetical protein. (213 aa)    
Predicted Functional Partners:
EGZ50823.1
KEGG: csa:Csal_1702 hypothetical protein.
  
     0.767
EGZ49016.1
Hypothetical protein; KEGG: net:Neut_0149 putative transposase.
  
     0.717
EGZ48513.1
KEGG: ana:alr7276 hypothetical protein.
  
     0.625
EGZ39126.1
KEGG: mar:MAE_26270 hypothetical protein.
  
     0.552
EGZ48010.1
KEGG: tel:tlr2328 hypothetical protein.
  
     0.545
EGZ48993.1
PFAM: Protein of unknown function DUF29; KEGG: app:CAP2UW1_1326 protein of unknown function DUF29.
  
     0.539
EGZ48510.1
PFAM: Protein of unknown function DUF29; KEGG: gvi:glr1481 hypothetical protein.
  
     0.533
EGZ49402.1
TIGRFAM: Conserved hypothetical protein CHP02449; KEGG: tgr:Tgr7_2767 hypothetical protein.
  
     0.493
EGZ47168.1
TIGRFAM: Conserved hypothetical protein CHP01784; KEGG: psa:PST_3826 hypothetical protein.
  
     0.486
EGZ45059.1
PFAM: Protein of unknown function DUF1626; KEGG: cyh:Cyan8802_4234 protein of unknown function DUF1626.
  
     0.466
Your Current Organism:
Thiorhodospira sibirica
NCBI taxonomy Id: 765914
Other names: T. sibirica ATCC 700588, Thiorhodospira sibirica A12, Thiorhodospira sibirica ATCC 700588, Thiorhodospira sibirica str. ATCC 700588, Thiorhodospira sibirica strain ATCC 700588
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.