STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGZ49871.1KEGG: tgr:Tgr7_0608 putative sulfate transporter YchM; TIGRFAM: Sulphate anion transporter; PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS. (584 aa)    
Predicted Functional Partners:
EGZ49857.1
Cytochrome b/b6 domain protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
 
 0.939
EGZ50238.1
KEGG: tgr:Tgr7_3253 protein tyrosine/serine phosphatase.
   
   0.936
EGZ44669.1
Metallophosphoesterase; PFAM: Metallo-dependent phosphatase; KEGG: nde:NIDE1906 putative metallophosphoesterase.
  
   0.934
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
   0.933
EGZ43590.1
KEGG: hha:Hhal_0149 cytochrome c family protein.
    
   0.931
EGZ46266.1
Hypothetical protein; KEGG: spu:587405 similar to ankyrin 2,3/unc44.
    
 
 0.915
EGZ45415.1
Hypothetical protein.
    
 
 0.915
EGZ43376.1
Ankyrin; KEGG: spu:579825 similar to ankyrin 2,3/unc44; PFAM: Ankyrin repeat; SMART: Ankyrin repeat.
    
 
 0.915
EGZ48972.1
TIGRFAM: NADH-quinone oxidoreductase, chain M/4; KEGG: tgr:Tgr7_0998 proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase.
  
 
 0.898
EGZ45087.1
TIGRFAM: NADH-quinone oxidoreductase, chain M/4; KEGG: gau:GAU_2391 NADH-quinone oxidoreductase chain M; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase.
  
 
 0.898
Your Current Organism:
Thiorhodospira sibirica
NCBI taxonomy Id: 765914
Other names: T. sibirica ATCC 700588, Thiorhodospira sibirica A12, Thiorhodospira sibirica ATCC 700588, Thiorhodospira sibirica str. ATCC 700588, Thiorhodospira sibirica strain ATCC 700588
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