STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGZ49008.1KEGG: tgr:Tgr7_1793 CRISPR-associated RAMP protein, Cmr4 family; TIGRFAM: CRISPR-associated RAMP Cmr4; PFAM: Protein of unknown function DUF324. (300 aa)    
Predicted Functional Partners:
EGZ49007.1
KEGG: tra:Trad_1451 CRISPR-associated protein, Cmr5 family; TIGRFAM: CRISPR-associated protein, Cmr5; PFAM: CRISPR-associated protein, Cmr5.
 
 
 
 0.996
EGZ49006.1
KEGG: tgr:Tgr7_1795 CRISPR-associated RAMP protein, Cmr6 family; TIGRFAM: CRISPR-associated protein, TM1791; PFAM: Protein of unknown function DUF324.
 
 
 
 0.995
EGZ49010.1
KEGG: tgr:Tgr7_1791 CRISPR-associated protein, Crm2 family.
 
 
 
 0.994
EGZ48994.1
TIGRFAM: CRISPR-associated protein Crm2; KEGG: alv:Alvin_3129 CRISPR-associated protein, Crm2 family.
 
 
 
 0.988
EGZ48989.1
KEGG: alv:Alvin_3133 CRISPR-associated RAMP protein, Cmr6 family; TIGRFAM: CRISPR-associated protein, TM1791; PFAM: Protein of unknown function DUF324.
 
 
 
 0.984
EGZ49011.1
KEGG: tgr:Tgr7_1790 CRISPR-associated RAMP protein, Cmr1 family; TIGRFAM: CRISPR-associated protein TM1795 family, N-terminal; PFAM: Protein of unknown function DUF324.
 
 
 
 0.972
EGZ48990.1
KEGG: alv:Alvin_3132 CRISPR-associated protein, Cmr5 family; TIGRFAM: CRISPR-associated protein, Cmr5; PFAM: CRISPR-associated protein, Cmr5.
   
 
 0.947
EGZ48995.1
TIGRFAM: CRISPR-associated protein TM1795 family, N-terminal; KEGG: alv:Alvin_3128 CRISPR-associated RAMP protein, Cmr1 family.
 
 
 
 0.941
EGZ49009.1
PFAM: CRISPR-associated protein, Cmr3; KEGG: tgr:Tgr7_1792 hypothetical protein.
 
   
 0.917
EGZ49012.1
KEGG: nhl:Nhal_2827 hypothetical protein.
 
   
 0.868
Your Current Organism:
Thiorhodospira sibirica
NCBI taxonomy Id: 765914
Other names: T. sibirica ATCC 700588, Thiorhodospira sibirica A12, Thiorhodospira sibirica ATCC 700588, Thiorhodospira sibirica str. ATCC 700588, Thiorhodospira sibirica strain ATCC 700588
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