STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGZ47718.1Hypothetical protein; KEGG: nwa:Nwat_2354 general secretion pathway protein K. (311 aa)    
Predicted Functional Partners:
EGZ49617.1
KEGG: nwa:Nwat_2355 general secretion pathway protein J.
 
 
 0.992
EGZ44801.1
TIGRFAM: General secretion pathway protein J; Prepilin-type cleavage/methylation, N-terminal; KEGG: aeh:Mlg_2388 general secretion pathway protein J.
  
 
 0.977
EGZ44162.1
KEGG: nhl:Nhal_0443 general secretion pathway protein H.
 
 
 0.971
EGZ44800.1
TIGRFAM: General secretion pathway protein I; Prepilin-type cleavage/methylation, N-terminal; KEGG: tgr:Tgr7_0233 general secretion pathway protein I.
  
 
 0.964
EGZ48855.1
KEGG: tkm:TK90_0218 Tfp pilus assembly protein PilW-like protein.
  
 
 0.959
EGZ47717.1
PFAM: Fimbrial assembly; KEGG: nhl:Nhal_3651 fimbrial assembly family protein.
 
   
 0.954
EGZ47716.1
PFAM: General secretion pathway protein M; KEGG: mca:MCA1122 general secretion pathway protein, putative.
 
   
 0.949
EGZ44056.1
KEGG: noc:Noc_2893 general secretion pathway protein G; TIGRFAM: General secretion pathway protein G; Prepilin-type cleavage/methylation, N-terminal; PFAM: Type II secretion system protein G; Prepilin-type cleavage/methylation, N-terminal.
 
 
 0.947
EGZ47714.1
KEGG: nhl:Nhal_3648 general secretion pathway protein D; TIGRFAM: Type II secretion system GspD; PFAM: Type II/III secretion system; NolW-like.
 
   
 0.907
EGZ44798.1
KEGG: tgr:Tgr7_0231 general secretion pathway protein G; TIGRFAM: General secretion pathway protein G; Prepilin-type cleavage/methylation, N-terminal; PFAM: Type II secretion system protein G; Prepilin-type cleavage/methylation, N-terminal.
 
 
 0.889
Your Current Organism:
Thiorhodospira sibirica
NCBI taxonomy Id: 765914
Other names: T. sibirica ATCC 700588, Thiorhodospira sibirica A12, Thiorhodospira sibirica ATCC 700588, Thiorhodospira sibirica str. ATCC 700588, Thiorhodospira sibirica strain ATCC 700588
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.