STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGZ45403.1KEGG: msv:Mesil_0322 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; PFAM: Ribulose bisphosphate carboxylase, large subunit, C-terminal. (366 aa)    
Predicted Functional Partners:
EGZ45902.1
PFAM: Ribulose bisphosphate carboxylase, small chain; KEGG: hha:Hhal_1045 ribulose-bisphosphate carboxylase; SMART: Ribulose bisphosphate carboxylase, small chain.
 
 0.996
EGZ45101.1
PFAM: Bacterial transferase hexapeptide repeat; KEGG: aha:AHA_0748 carbonic anhydrase.
    
 
 0.937
EGZ43055.1
Phosphoribulokinase; KEGG: tgr:Tgr7_3240 phosphoribulokinase; PFAM: Phosphoribulokinase/uridine kinase.
 
 
 0.926
EGZ45402.1
PFAM: Cupin 2, conserved barrel; KEGG: rva:Rvan_0193 cupin 2 conserved barrel domain protein.
 
   
 0.904
pgk
HAMAP: Phosphoglycerate kinase; KEGG: tgr:Tgr7_2891 phosphoglycerate kinase; PFAM: Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
    
 0.891
cbbL
Ribulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily.
  
  
 
0.834
EGZ50759.1
Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.
    
 0.799
EGZ45404.1
PFAM: Protein of unknown function DUF457, transmembrane; KEGG: nhl:Nhal_3592 membrane-bound metal-dependent hydrolase.
       0.645
EGZ44517.1
Thioredoxin; KEGG: tgr:Tgr7_2125 thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain.
    
 
 0.612
EGZ44223.1
Thioredoxin; KEGG: tgr:Tgr7_2426 thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain; Belongs to the thioredoxin family.
    
 
 0.612
Your Current Organism:
Thiorhodospira sibirica
NCBI taxonomy Id: 765914
Other names: T. sibirica ATCC 700588, Thiorhodospira sibirica A12, Thiorhodospira sibirica ATCC 700588, Thiorhodospira sibirica str. ATCC 700588, Thiorhodospira sibirica strain ATCC 700588
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