STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGZ45286.1KEGG: pin:Ping_2356 hypothetical protein. (166 aa)    
Predicted Functional Partners:
EGZ45285.1
PFAM: Protein of unknown function DUF2058; KEGG: hha:Hhal_1167 hypothetical protein.
       0.648
EGZ45284.1
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
       0.472
EGZ45282.1
PFAM: Isochorismatase-like; KEGG: tgr:Tgr7_0181 isochorismatase hydrolase.
       0.450
EGZ45283.1
NADH dehydrogenase (quinone); PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; Ferredoxin; Molybdopterin oxidoreductase, Fe4S4 domain; KEGG: gau:GAU_2397 putative NADH-quinone oxidoreductase chain G; SMART: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding.
       0.450
EGZ45287.1
KEGG: tmz:Tmz1t_0134 hypothetical protein.
       0.443
coaX
Putative transcriptional acitvator, Baf family; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.
       0.430
Your Current Organism:
Thiorhodospira sibirica
NCBI taxonomy Id: 765914
Other names: T. sibirica ATCC 700588, Thiorhodospira sibirica A12, Thiorhodospira sibirica ATCC 700588, Thiorhodospira sibirica str. ATCC 700588, Thiorhodospira sibirica strain ATCC 700588
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