STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGZ44678.1KEGG: tgr:Tgr7_1512 poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit; TIGRFAM: Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit; PFAM: Alpha/beta hydrolase fold-1. (357 aa)    
Predicted Functional Partners:
EGZ44679.1
TIGRFAM: Poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit; KEGG: tgr:Tgr7_1513 hypothetical protein.
 
  
 0.995
EGZ48154.1
Phosphate butyryltransferase; KEGG: rpb:RPB_1026 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; PFAM: Phosphate acetyl/butaryl transferase; MaoC-like dehydratase.
 
 
 0.963
EGZ44683.1
acetoacetyl-CoA reductase; SMART: Polyketide synthase/Fatty acid synthase, KR; TIGRFAM: Acetoacetyl-CoA reductase; KEGG: tgr:Tgr7_1519 acetoacetyl-CoA reductase; PFAM: Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.958
EGZ44681.1
KEGG: tgr:Tgr7_1516 polyhydroxyalkonate synthesis repressor, PhaR; TIGRFAM: Polyhydroxyalkanoate synthesis repressor PhaR; PFAM: PHA accumulation regulator DNA-binding, N-terminal; PHB accumulation regulatory.
 
   
 0.882
EGZ44680.1
TIGRFAM: Thiolase; KEGG: tgr:Tgr7_1514 acetyl-CoA acetyltransferase; PFAM: Thiolase, N-terminal; Thiolase, C-terminal; Belongs to the thiolase-like superfamily. Thiolase family.
 
  
 0.736
EGZ47557.1
3-oxoacyl-(acyl-carrier-protein) reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.493
EGZ46530.1
KEGG: tgr:Tgr7_0328 pteridine reductase; PFAM: Short-chain dehydrogenase/reductase SDR.
  
 
 0.493
EGZ41508.1
PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: tgr:Tgr7_1522 short-chain dehydrogenase/reductase SDR.
  
 
 0.493
EGZ47572.1
PFAM: Patatin/Phospholipase A2-related; KEGG: aeh:Mlg_1769 patatin.
 
   
 0.411
Your Current Organism:
Thiorhodospira sibirica
NCBI taxonomy Id: 765914
Other names: T. sibirica ATCC 700588, Thiorhodospira sibirica A12, Thiorhodospira sibirica ATCC 700588, Thiorhodospira sibirica str. ATCC 700588, Thiorhodospira sibirica strain ATCC 700588
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