STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGZ44008.1KEGG: maq:Maqu_4027 transposase, IS4 family protein. (81 aa)    
Predicted Functional Partners:
EGZ44007.1
PFAM: Transposase, IS4-like; KEGG: maq:Maqu_4027 transposase, IS4 family protein.
 
     0.916
EGZ47195.1
PFAM: Transposase, IS4-like; KEGG: maq:Maqu_4027 transposase, IS4 family protein.
  
     0.775
EGZ41563.1
PFAM: Transposase, IS4-like; KEGG: tgr:Tgr7_1308 ISRSO18-transposase protein.
  
     0.775
EGZ40042.1
Hypothetical protein; KEGG: tgr:Tgr7_0618 ISRSO18-transposase protein.
  
     0.775
EGZ39235.1
PFAM: Transposase, IS4-like; KEGG: bge:BC1002_6949 transposase IS4 family protein.
  
     0.775
EGZ38376.1
PFAM: Transposase, IS4-like; KEGG: maq:Maqu_4027 transposase, IS4 family protein.
  
     0.775
EGZ38299.1
PFAM: Transposase, IS4-like; KEGG: maq:Maqu_4027 transposase, IS4 family protein.
  
     0.775
EGZ44156.1
KEGG: maq:Maqu_3832 transposase, IS4 family protein.
  
     0.774
EGZ42359.1
KEGG: maq:Maqu_3832 transposase, IS4 family protein.
  
     0.774
EGZ42322.1
KEGG: maq:Maqu_3832 transposase, IS4 family protein.
  
     0.774
Your Current Organism:
Thiorhodospira sibirica
NCBI taxonomy Id: 765914
Other names: T. sibirica ATCC 700588, Thiorhodospira sibirica A12, Thiorhodospira sibirica ATCC 700588, Thiorhodospira sibirica str. ATCC 700588, Thiorhodospira sibirica strain ATCC 700588
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