STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGZ43144.1Putative signal transduction protein; PFAM: Metal-dependent hydrolase HDOD; KEGG: tgr:Tgr7_1323 putative signal transduction protein. (481 aa)    
Predicted Functional Partners:
EGZ43146.1
Stage II sporulation protein E; KEGG: alv:Alvin_2478 protein serine/threonine phosphatase; PFAM: Sporulation stage II, protein E C-terminal; SMART: Protein phosphatase 2C-like.
 
     0.800
EGZ43145.1
KEGG: alv:Alvin_2477 putative anti-sigma regulatory factor, serine/threonine protein kinase.
       0.773
EGZ48003.1
Putative signal transduction protein; PFAM: Metal-dependent hydrolase HDOD; KEGG: tgr:Tgr7_2695 metal dependent phosphohydrolase.
  
     0.771
EGZ47863.1
Putative signal transduction protein; PFAM: Metal-dependent hydrolase HDOD; Domain of unknown function DUF304l; KEGG: tgr:Tgr7_2695 metal dependent phosphohydrolase.
  
     0.771
EGZ45093.1
Putative signal transduction protein; PFAM: Metal-dependent hydrolase HDOD; KEGG: tgr:Tgr7_2695 metal dependent phosphohydrolase; overlaps another CDS with the same product name.
  
     0.771
EGZ45092.1
Putative signal transduction protein; PFAM: Metal-dependent hydrolase HDOD; KEGG: tgr:Tgr7_2694 metal dependent phosphohydrolase; overlaps another CDS with the same product name.
  
     0.770
EGZ43375.1
Putative signal transduction protein; PFAM: Metal-dependent hydrolase HDOD; Domain of unknown function DUF304l; KEGG: tgr:Tgr7_2695 metal dependent phosphohydrolase.
  
     0.768
EGZ47019.1
FlgN family protein; PFAM: FlgN-like domain; KEGG: tgr:Tgr7_1212 FlgN family protein.
 
     0.761
EGZ49626.1
Putative signal transduction protein; PFAM: Metal-dependent hydrolase HDOD; KEGG: tgr:Tgr7_0663 metal dependent phosphohydrolase.
  
     0.743
EGZ50596.1
Putative signal transduction protein; KEGG: tgr:Tgr7_1038 metal dependent phosphohydrolase; TIGRFAM: Uncharacterised protein family HDIG; PFAM: Metal-dependent hydrolase HDOD.
  
     0.739
Your Current Organism:
Thiorhodospira sibirica
NCBI taxonomy Id: 765914
Other names: T. sibirica ATCC 700588, Thiorhodospira sibirica A12, Thiorhodospira sibirica ATCC 700588, Thiorhodospira sibirica str. ATCC 700588, Thiorhodospira sibirica strain ATCC 700588
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