STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGZ37735.1KEGG: alv:Alvin_2254 hypothetical protein. (103 aa)    
Predicted Functional Partners:
EGZ44718.1
PFAM: Nickel transport complex, NikM subunit, transmembrane; KEGG: dbr:Deba_0542 nickel transport complex, NikM subunit, transmembrane.
 
     0.787
EGZ44716.1
Small GTP-binding protein; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
 
     0.781
EGZ44717.1
KEGG: alv:Alvin_2255 FeoA family protein; PFAM: Ferrous iron transporter, FeoA subunit; SMART: Ferrous iron transporter, FeoA subunit.
 
     0.733
EGZ37736.1
Hypothetical protein.
       0.682
EGZ43760.1
KEGG: rva:Rvan_0378 hypothetical protein.
  
     0.598
EGZ37734.1
Hypothetical protein.
       0.536
EGZ45396.1
KEGG: rsq:Rsph17025_3435 ABC-type Co2+ transport system permease component-like protein.
  
     0.531
EGZ47386.1
PFAM: Cobalamin (vitamin B12) biosynthesis CbiM; KEGG: rpe:RPE_4294 cobalt transport protein CbiM.
  
     0.460
znuC
ABC transporter related protein; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.
  
    0.417
EGZ43755.1
ABC-type transporter, integral membrane subunit; PFAM: ABC-3; KEGG: tgr:Tgr7_2749 ABC-3 protein.
  
    0.417
Your Current Organism:
Thiorhodospira sibirica
NCBI taxonomy Id: 765914
Other names: T. sibirica ATCC 700588, Thiorhodospira sibirica A12, Thiorhodospira sibirica ATCC 700588, Thiorhodospira sibirica str. ATCC 700588, Thiorhodospira sibirica strain ATCC 700588
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