Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFW13796.1 | SFW13988.1 | SAMN05660313_00033 | SAMN05660313_00046 | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | Carbamoyl-phosphate synthase large subunit. | 0.564 |
SFW13796.1 | SFW16550.1 | SAMN05660313_00033 | SAMN05660313_00231 | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | Carbamoyl-phosphate synthase large subunit. | 0.564 |
SFW13796.1 | SFW18494.1 | SAMN05660313_00033 | SAMN05660313_00347 | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | Dihydroorotase. | 0.937 |
SFW13796.1 | SFW61609.1 | SAMN05660313_00033 | SAMN05660313_02847 | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | Dihydroorotase. | 0.771 |
SFW13796.1 | SFW66011.1 | SAMN05660313_00033 | SAMN05660313_03204 | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | 0.985 |
SFW13796.1 | carA | SAMN05660313_00033 | SAMN05660313_01502 | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.640 |
SFW13796.1 | pyrB | SAMN05660313_00033 | SAMN05660313_00034 | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.993 |
SFW13796.1 | pyrD | SAMN05660313_00033 | SAMN05660313_01105 | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.682 |
SFW13988.1 | SFW13796.1 | SAMN05660313_00046 | SAMN05660313_00033 | Carbamoyl-phosphate synthase large subunit. | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | 0.564 |
SFW13988.1 | SFW18494.1 | SAMN05660313_00046 | SAMN05660313_00347 | Carbamoyl-phosphate synthase large subunit. | Dihydroorotase. | 0.791 |
SFW13988.1 | SFW38782.1 | SAMN05660313_00046 | SAMN05660313_01364 | Carbamoyl-phosphate synthase large subunit. | Asparagine synthase (glutamine-hydrolysing). | 0.405 |
SFW13988.1 | SFW61609.1 | SAMN05660313_00046 | SAMN05660313_02847 | Carbamoyl-phosphate synthase large subunit. | Dihydroorotase. | 0.972 |
SFW13988.1 | SFW66011.1 | SAMN05660313_00046 | SAMN05660313_03204 | Carbamoyl-phosphate synthase large subunit. | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | 0.629 |
SFW13988.1 | carA | SAMN05660313_00046 | SAMN05660313_01502 | Carbamoyl-phosphate synthase large subunit. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.999 |
SFW13988.1 | purA | SAMN05660313_00046 | SAMN05660313_01055 | Carbamoyl-phosphate synthase large subunit. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.677 |
SFW13988.1 | pyrB | SAMN05660313_00046 | SAMN05660313_00034 | Carbamoyl-phosphate synthase large subunit. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.999 |
SFW13988.1 | pyrD | SAMN05660313_00046 | SAMN05660313_01105 | Carbamoyl-phosphate synthase large subunit. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.899 |
SFW16550.1 | SFW13796.1 | SAMN05660313_00231 | SAMN05660313_00033 | Carbamoyl-phosphate synthase large subunit. | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | 0.564 |
SFW16550.1 | SFW18494.1 | SAMN05660313_00231 | SAMN05660313_00347 | Carbamoyl-phosphate synthase large subunit. | Dihydroorotase. | 0.636 |
SFW16550.1 | SFW38782.1 | SAMN05660313_00231 | SAMN05660313_01364 | Carbamoyl-phosphate synthase large subunit. | Asparagine synthase (glutamine-hydrolysing). | 0.405 |
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