STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW18027.1Two component transcriptional regulator, LytTR family. (248 aa)    
Predicted Functional Partners:
SFW17482.1
Two component transcriptional regulator, LytTR family.
  
  
  0.882
SFW15043.1
Two component transcriptional regulator, LytTR family.
  
  
  0.867
SFW18041.1
Two-component sensor histidine kinase, contains HisKA and HATPase domains.
 
     0.787
SFW24984.1
Two-component sensor histidine kinase, contains HisKA and HATPase domains.
 
     0.782
SFW48449.1
Two component transcriptional regulator, LytTR family.
  
  
  0.704
SFW65321.1
Response regulator receiver domain-containing protein.
  
  
  0.651
SFW18003.1
Hypothetical protein.
       0.648
menA
1,4-dihydroxy-2-naphthoate prenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.
       0.648
SFW41756.1
Two component transcriptional regulator, LytTR family.
  
  
  0.643
SFW37443.1
Signal transduction histidine kinase.
 
  
  0.594
Your Current Organism:
Cellulophaga fucicola
NCBI taxonomy Id: 76595
Other names: ATCC 700863, C. fucicola, CIP 106308, DSM 24786, JCM 21778, LMG 18536, LMG:18536, strain NN015860
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.