Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFW23827.1 | SFW23846.1 | SAMN05660313_00693 | SAMN05660313_00694 | Hypothetical protein. | Type I restriction enzyme M protein. | 0.523 |
SFW23827.1 | SFW23859.1 | SAMN05660313_00693 | SAMN05660313_00695 | Hypothetical protein. | Fic/DOC family protein. | 0.523 |
SFW23846.1 | SFW23827.1 | SAMN05660313_00694 | SAMN05660313_00693 | Type I restriction enzyme M protein. | Hypothetical protein. | 0.523 |
SFW23846.1 | SFW23859.1 | SAMN05660313_00694 | SAMN05660313_00695 | Type I restriction enzyme M protein. | Fic/DOC family protein. | 0.939 |
SFW23846.1 | SFW23876.1 | SAMN05660313_00694 | SAMN05660313_00696 | Type I restriction enzyme M protein. | Type I restriction enzyme, S subunit. | 0.999 |
SFW23846.1 | SFW23889.1 | SAMN05660313_00694 | SAMN05660313_00697 | Type I restriction enzyme M protein. | Type I restriction enzyme, R subunit. | 0.961 |
SFW23859.1 | SFW23827.1 | SAMN05660313_00695 | SAMN05660313_00693 | Fic/DOC family protein. | Hypothetical protein. | 0.523 |
SFW23859.1 | SFW23846.1 | SAMN05660313_00695 | SAMN05660313_00694 | Fic/DOC family protein. | Type I restriction enzyme M protein. | 0.939 |
SFW23859.1 | SFW23876.1 | SAMN05660313_00695 | SAMN05660313_00696 | Fic/DOC family protein. | Type I restriction enzyme, S subunit. | 0.864 |
SFW23859.1 | SFW23889.1 | SAMN05660313_00695 | SAMN05660313_00697 | Fic/DOC family protein. | Type I restriction enzyme, R subunit. | 0.654 |
SFW23859.1 | ligA | SAMN05660313_00695 | SAMN05660313_00956 | Fic/DOC family protein. | DNA ligase (NAD+); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | 0.729 |
SFW23876.1 | SFW23846.1 | SAMN05660313_00696 | SAMN05660313_00694 | Type I restriction enzyme, S subunit. | Type I restriction enzyme M protein. | 0.999 |
SFW23876.1 | SFW23859.1 | SAMN05660313_00696 | SAMN05660313_00695 | Type I restriction enzyme, S subunit. | Fic/DOC family protein. | 0.864 |
SFW23876.1 | SFW23889.1 | SAMN05660313_00696 | SAMN05660313_00697 | Type I restriction enzyme, S subunit. | Type I restriction enzyme, R subunit. | 0.983 |
SFW23889.1 | SFW23846.1 | SAMN05660313_00697 | SAMN05660313_00694 | Type I restriction enzyme, R subunit. | Type I restriction enzyme M protein. | 0.961 |
SFW23889.1 | SFW23859.1 | SAMN05660313_00697 | SAMN05660313_00695 | Type I restriction enzyme, R subunit. | Fic/DOC family protein. | 0.654 |
SFW23889.1 | SFW23876.1 | SAMN05660313_00697 | SAMN05660313_00696 | Type I restriction enzyme, R subunit. | Type I restriction enzyme, S subunit. | 0.983 |
ligA | SFW23859.1 | SAMN05660313_00956 | SAMN05660313_00695 | DNA ligase (NAD+); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | Fic/DOC family protein. | 0.729 |