STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW28711.1FecR family protein. (390 aa)    
Predicted Functional Partners:
SFW28725.1
RNA polymerase sigma-70 factor, ECF subfamily.
 
   0.856
SFW28701.1
TonB-linked outer membrane protein, SusC/RagA family.
 
    0.752
SFW27426.1
FecR family protein.
  
     0.750
SFW26769.1
Iron complex outermembrane recepter protein.
 
 
 0.718
SFW28687.1
SusD family protein.
 
     0.702
SFW40897.1
FecR family protein.
  
  
 
0.607
SFW20177.1
Outer membrane receptor proteins, mostly Fe transport.
  
    0.605
SFW27531.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
   0.593
SFW27418.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
   0.585
SFW38822.1
Hypothetical protein.
   
   0.526
Your Current Organism:
Cellulophaga fucicola
NCBI taxonomy Id: 76595
Other names: ATCC 700863, C. fucicola, CIP 106308, DSM 24786, JCM 21778, LMG 18536, LMG:18536, strain NN015860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.