SFW29327.1 protein (Cellulophaga fucicola) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:

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Experiments

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[Homology]

Score

SFW29327.1

RNA polymerase sigma-70 factor, ECF subfamily. (187 aa)

Predicted Functional Partners:

SFW29342.1

0.958

SFW13708.1

0.771

SFW43969.1

0.755

SFW47590.1

0.747

SFW27531.1

0.745

SFW23721.1

0.740

SFW27632.1

0.680

SFW29360.1

0.670

SFW14255.1

0.660

SFW29350.1

0.598

Your Current Organism:

Cellulophaga fucicola

NCBI taxonomy Id: 76595
Other names: ATCC 700863, C. fucicola, CIP 106308, DSM 24786, JCM 21778, LMG 18536, LMG:18536, strain NN015860

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SFW13708.1	SFW27531.1	SAMN05660313_00028	SAMN05660313_00997	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.768
SFW13708.1	SFW27632.1	SAMN05660313_00028	SAMN05660313_01006	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.555
SFW13708.1	SFW29327.1	SAMN05660313_00028	SAMN05660313_01112	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.771
SFW13708.1	SFW29342.1	SAMN05660313_00028	SAMN05660313_01113	RNA polymerase sigma-70 factor, ECF subfamily.	Anti-sigma-K factor rskA.	0.490
SFW13708.1	SFW29360.1	SAMN05660313_00028	SAMN05660313_01115	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.773
SFW14255.1	SFW23721.1	SAMN05660313_00063	SAMN05660313_00685	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.699
SFW14255.1	SFW27531.1	SAMN05660313_00063	SAMN05660313_00997	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.673
SFW14255.1	SFW27632.1	SAMN05660313_00063	SAMN05660313_01006	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.569
SFW14255.1	SFW29327.1	SAMN05660313_00063	SAMN05660313_01112	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.660
SFW14255.1	SFW29342.1	SAMN05660313_00063	SAMN05660313_01113	RNA polymerase sigma-70 factor, ECF subfamily.	Anti-sigma-K factor rskA.	0.490
SFW14255.1	SFW29360.1	SAMN05660313_00063	SAMN05660313_01115	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.684
SFW14255.1	SFW43969.1	SAMN05660313_00063	SAMN05660313_01690	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.620
SFW23721.1	SFW14255.1	SAMN05660313_00685	SAMN05660313_00063	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.699
SFW23721.1	SFW27531.1	SAMN05660313_00685	SAMN05660313_00997	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.749
SFW23721.1	SFW27632.1	SAMN05660313_00685	SAMN05660313_01006	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.462
SFW23721.1	SFW29327.1	SAMN05660313_00685	SAMN05660313_01112	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.740
SFW23721.1	SFW29342.1	SAMN05660313_00685	SAMN05660313_01113	RNA polymerase sigma-70 factor, ECF subfamily.	Anti-sigma-K factor rskA.	0.490
SFW23721.1	SFW29360.1	SAMN05660313_00685	SAMN05660313_01115	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.765
SFW23721.1	SFW43969.1	SAMN05660313_00685	SAMN05660313_01690	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.768
SFW27531.1	SFW13708.1	SAMN05660313_00997	SAMN05660313_00028	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.768