STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW30951.1Hypothetical protein. (75 aa)    
Predicted Functional Partners:
SFW30961.1
Multidrug resistance protein, MATE family.
 
     0.840
SFW30913.1
Undecaprenyl-diphosphatase.
 
     0.821
SFW68022.1
Hypothetical protein.
  
     0.767
SFW25725.1
Hypothetical protein.
  
     0.727
SFW63067.1
Mevalonate kinase.
  
     0.724
SFW13943.1
Hypothetical protein.
  
     0.716
SFW29509.1
Acyltransferase.
  
     0.685
SFW67806.1
Phage shock protein C (PspC) family protein.
  
     0.684
SFW43702.1
Hypothetical protein.
  
     0.676
SFW28832.1
pRiA4b ORF-3-like protein.
  
     0.647
Your Current Organism:
Cellulophaga fucicola
NCBI taxonomy Id: 76595
Other names: ATCC 700863, C. fucicola, CIP 106308, DSM 24786, JCM 21778, LMG 18536, LMG:18536, strain NN015860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.