SFW40830.1 protein (Cellulophaga fucicola) - STRING interaction network

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Score

SFW40830.1

Predicted transcriptional regulator YdeE, contains AraC-type DNA-binding domain. (153 aa)

Predicted Functional Partners:

SFW40846.1

0.953

rpoA

0.687

SFW40861.1

0.651

SFW27082.1

0.613

rpoB

0.613

rpoC

0.613

SFW40820.1

0.497

SFW20756.1

0.479

SFW21747.1

0.479

SFW68818.1

0.479

Your Current Organism:

Cellulophaga fucicola

NCBI taxonomy Id: 76595
Other names: ATCC 700863, C. fucicola, CIP 106308, DSM 24786, JCM 21778, LMG 18536, LMG:18536, strain NN015860

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SFW20756.1	SFW27082.1	SAMN05660313_00505	SAMN05660313_00952	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	RNA polymerase Rpb6.	0.774
SFW20756.1	SFW40830.1	SAMN05660313_00505	SAMN05660313_01487	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Predicted transcriptional regulator YdeE, contains AraC-type DNA-binding domain.	0.479
SFW20756.1	SFW40846.1	SAMN05660313_00505	SAMN05660313_01488	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	HTH domain-containing protein.	0.473
SFW20756.1	rpoA	SAMN05660313_00505	SAMN05660313_01504	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.868
SFW20756.1	rpoB	SAMN05660313_00505	SAMN05660313_03455	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.859
SFW20756.1	rpoC	SAMN05660313_00505	SAMN05660313_03456	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.844
SFW21747.1	SFW27082.1	SAMN05660313_00575	SAMN05660313_00952	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	RNA polymerase Rpb6.	0.774
SFW21747.1	SFW40830.1	SAMN05660313_00575	SAMN05660313_01487	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Predicted transcriptional regulator YdeE, contains AraC-type DNA-binding domain.	0.479
SFW21747.1	SFW40846.1	SAMN05660313_00575	SAMN05660313_01488	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	HTH domain-containing protein.	0.473
SFW21747.1	rpoA	SAMN05660313_00575	SAMN05660313_01504	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.866
SFW21747.1	rpoB	SAMN05660313_00575	SAMN05660313_03455	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.854
SFW21747.1	rpoC	SAMN05660313_00575	SAMN05660313_03456	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.842
SFW27082.1	SFW20756.1	SAMN05660313_00952	SAMN05660313_00505	RNA polymerase Rpb6.	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.774
SFW27082.1	SFW21747.1	SAMN05660313_00952	SAMN05660313_00575	RNA polymerase Rpb6.	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.774
SFW27082.1	SFW40830.1	SAMN05660313_00952	SAMN05660313_01487	RNA polymerase Rpb6.	Predicted transcriptional regulator YdeE, contains AraC-type DNA-binding domain.	0.613
SFW27082.1	SFW40846.1	SAMN05660313_00952	SAMN05660313_01488	RNA polymerase Rpb6.	HTH domain-containing protein.	0.613
SFW27082.1	SFW68818.1	SAMN05660313_00952	SAMN05660313_03437	RNA polymerase Rpb6.	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.774
SFW27082.1	rpoA	SAMN05660313_00952	SAMN05660313_01504	RNA polymerase Rpb6.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
SFW27082.1	rpoB	SAMN05660313_00952	SAMN05660313_03455	RNA polymerase Rpb6.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
SFW27082.1	rpoC	SAMN05660313_00952	SAMN05660313_03456	RNA polymerase Rpb6.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999