STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW46718.1Biopolymer transport protein ExbB. (245 aa)    
Predicted Functional Partners:
SFW46699.1
Biopolymer transport protein ExbD.
 
 
 0.987
SFW46688.1
Biopolymer transport protein ExbD.
 
 
 0.984
SFW43244.1
Outer membrane transport energization protein ExbD.
 
 
 0.908
SFW45894.1
Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
   0.882
SFW57654.1
Hypothetical protein.
  
 
 0.796
SFW49317.1
TonB-dependent Receptor Plug Domain.
  
 
 0.779
SFW37093.1
TonB protein C-terminal.
  
   0.766
SFW45881.1
Protein TonB.
  
   0.751
SFW56360.1
Protein of unknown function.
  
     0.713
SFW46709.1
Hypothetical protein.
       0.701
Your Current Organism:
Cellulophaga fucicola
NCBI taxonomy Id: 76595
Other names: ATCC 700863, C. fucicola, CIP 106308, DSM 24786, JCM 21778, LMG 18536, LMG:18536, strain NN015860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.