STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW47079.12-dehydro-3-deoxygalactonokinase. (319 aa)    
Predicted Functional Partners:
SFW47044.1
D-galactarolactone cycloisomerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
 
 0.990
SFW47104.1
2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase.
 
  
 0.951
SFW47061.1
Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
     0.843
SFW47030.1
L-rhamnose-H+ transport protein.
 
     0.798
SFW66088.1
L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
 
 0.659
SFW47187.1
Hypothetical protein.
 
     0.534
SFW47130.1
Beta-galactosidase.
       0.464
SFW66106.1
L-rhamnose-proton symport protein (RhaT).
  
     0.442
SFW47149.1
Hypothetical protein.
       0.438
SFW14949.1
Calcineurin-like phosphoesterase.
  
     0.426
Your Current Organism:
Cellulophaga fucicola
NCBI taxonomy Id: 76595
Other names: ATCC 700863, C. fucicola, CIP 106308, DSM 24786, JCM 21778, LMG 18536, LMG:18536, strain NN015860
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