STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW48219.1Manganese/zinc/iron transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family. (307 aa)    
Predicted Functional Partners:
SFW48172.1
Manganese/zinc/iron transport system permease protein.
 
 0.999
SFW48203.1
Manganese/zinc/iron transport system ATP-binding protein.
 
 
 0.999
SFW48190.1
Manganese/zinc/iron transport system permease protein.
 
 0.998
SFW48269.1
Iron (metal) dependent repressor, DtxR family.
  
 
 0.905
SFW48283.1
Outer membrane receptor for ferrienterochelin and colicins.
  
    0.569
SFW48159.1
Hypothetical protein.
       0.559
SFW48300.1
Thioredoxin-like domain-containing protein.
       0.559
rpsN
SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
  
  
 0.541
rpmB
Large subunit ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.530
SFW48144.1
Uncharacterized membrane protein YgdD, TMEM256/DUF423 family.
       0.511
Your Current Organism:
Cellulophaga fucicola
NCBI taxonomy Id: 76595
Other names: ATCC 700863, C. fucicola, CIP 106308, DSM 24786, JCM 21778, LMG 18536, LMG:18536, strain NN015860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.