STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW50120.1Cysteine desulfuration protein SufE. (140 aa)    
Predicted Functional Partners:
SFW50131.1
Cysteine desulfurase / selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 0.995
SFW50107.1
FeS assembly SUF system protein.
     0.925
SFW50144.1
Fe-S cluster assembly protein SufD.
 
   0.845
SFW27584.1
Selenocysteine lyase/Cysteine desulfurase.
  
 0.832
SFW50169.1
Iron-regulated ABC transporter membrane component SufB.
 
   0.818
SFW50157.1
Fe-S cluster assembly ATP-binding protein.
 
   0.805
SFW50094.1
Protein of unknown function.
       0.616
SFW50082.1
Protein of unknown function.
       0.429
Your Current Organism:
Cellulophaga fucicola
NCBI taxonomy Id: 76595
Other names: ATCC 700863, C. fucicola, CIP 106308, DSM 24786, JCM 21778, LMG 18536, LMG:18536, strain NN015860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.