STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW53250.1Protein of unknown function. (259 aa)    
Predicted Functional Partners:
SFW53261.1
Tryptophan 2,3-dioxygenase.
   
   0.862
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
       0.811
SFW53274.1
Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain.
       0.773
SFW30913.1
Undecaprenyl-diphosphatase.
  
     0.628
SFW46426.1
Uncharacterized membrane protein YfcA.
  
     0.597
SFW44726.1
Beta-barrel assembly machine subunit BamA.
  
     0.553
SFW63077.1
4-hydroxybenzoate polyprenyltransferase.
  
     0.546
SFW67974.1
PASTA domain-containing protein.
  
     0.545
SFW39399.1
Hypothetical protein.
  
     0.521
SFW54278.1
UDP-2,3-diacylglucosamine hydrolase.
  
     0.518
Your Current Organism:
Cellulophaga fucicola
NCBI taxonomy Id: 76595
Other names: ATCC 700863, C. fucicola, CIP 106308, DSM 24786, JCM 21778, LMG 18536, LMG:18536, strain NN015860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.