STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW53400.1PAS domain S-box-containing protein. (733 aa)    
Predicted Functional Partners:
SFW14634.1
ABC-type sugar transport system, substrate-binding protein, contains N-terminal xre family HTH domain.
0.999
SFW21417.1
His Kinase A (phospho-acceptor) domain-containing protein.
0.999
SFW21757.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
0.999
SFW29393.1
Signal transduction histidine kinase.
0.999
SFW37443.1
Signal transduction histidine kinase.
 0.999
SFW56280.1
Signal transduction histidine kinase.
0.999
SFW59546.1
Hypothetical protein.
 
0.999
SFW66184.1
Signal transduction histidine kinase.
 
 0.999
SFW47407.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
0.995
SFW54692.1
PAS domain S-box-containing protein.
 
 
0.992
Your Current Organism:
Cellulophaga fucicola
NCBI taxonomy Id: 76595
Other names: ATCC 700863, C. fucicola, CIP 106308, DSM 24786, JCM 21778, LMG 18536, LMG:18536, strain NN015860
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