STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW53634.1Ca-activated chloride channel family protein. (332 aa)    
Predicted Functional Partners:
SFW53658.1
Tetratricopeptide repeat-containing protein.
     0.985
SFW53670.1
Oxygen tolerance.
    0.966
SFW53613.1
Protein of unknown function DUF58.
 
    0.958
SFW53681.1
SH3 domain-containing protein.
 
     0.921
SFW53623.1
Hypothetical protein.
 
     0.918
SFW53602.1
MoxR-like ATPase.
 
 
  0.897
SFW53647.1
Ca-activated chloride channel family protein.
 
   
0.821
SFW15160.1
Magnesium chelatase subunit I.
  
 0.762
SFW59407.1
Protein of unknown function DUF58.
 
    0.589
SFW60407.1
DKNYY family protein.
    
   0.551
Your Current Organism:
Cellulophaga fucicola
NCBI taxonomy Id: 76595
Other names: ATCC 700863, C. fucicola, CIP 106308, DSM 24786, JCM 21778, LMG 18536, LMG:18536, strain NN015860
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.