STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW54026.1Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (449 aa)    
Predicted Functional Partners:
SFW54014.1
DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains.
 
  0.972
SFW53988.1
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.887
SFW54003.1
Outer membrane efflux protein.
 
     0.872
SFW59546.1
Hypothetical protein.
 
 
0.868
SFW37443.1
Signal transduction histidine kinase.
 
 
0.844
SFW56280.1
Signal transduction histidine kinase.
 
 
 0.839
SFW66184.1
Signal transduction histidine kinase.
 
 
0.829
SFW53972.1
Putative ABC transport system ATP-binding protein.
 
     0.819
SFW53931.1
Putative ABC transport system permease protein.
 
    0.818
SFW14634.1
ABC-type sugar transport system, substrate-binding protein, contains N-terminal xre family HTH domain.
 
0.815
Your Current Organism:
Cellulophaga fucicola
NCBI taxonomy Id: 76595
Other names: ATCC 700863, C. fucicola, CIP 106308, DSM 24786, JCM 21778, LMG 18536, LMG:18536, strain NN015860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.