STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW54396.1Nucleotide-binding universal stress protein, UspA family. (267 aa)    
Predicted Functional Partners:
SFW13228.1
Hypothetical protein.
  
     0.647
SFW54374.1
Putative efflux protein, MATE family.
 
     0.612
SFW17597.1
Hypothetical protein.
  
     0.561
SFW54385.1
Acetyltransferase (GNAT) family protein.
       0.530
SFW56420.1
Hypothetical protein.
  
     0.515
SFW68079.1
Acyl-CoA-binding protein.
  
     0.468
SFW54351.1
Protein of unknown function.
       0.462
SFW54364.1
methylglutaconyl-CoA hydratase.
       0.462
SFW50231.1
Hypothetical protein.
  
    0.460
SFW43268.1
Sodium/proton antiporter, NhaD family.
 
   
 0.450
Your Current Organism:
Cellulophaga fucicola
NCBI taxonomy Id: 76595
Other names: ATCC 700863, C. fucicola, CIP 106308, DSM 24786, JCM 21778, LMG 18536, LMG:18536, strain NN015860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.