STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW54646.1Two component transcriptional regulator, LytTR family. (239 aa)    
Predicted Functional Partners:
SFW17482.1
Two component transcriptional regulator, LytTR family.
  
  
  0.891
SFW54656.1
Hypothetical protein.
 
     0.888
SFW57426.1
Histidine kinase.
  
  0.836
SFW14997.1
Putative regulator of cell autolysis.
  
  0.833
SFW55863.1
Histidine kinase.
  
  0.833
SFW14043.1
TPR repeat-containing protein.
  
   0.809
SFW41782.1
Histidine kinase.
  
   0.809
SFW20233.1
GHKL domain-containing protein.
  
   0.808
SFW37978.1
Histidine kinase.
  
   0.805
SFW54668.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
     0.803
Your Current Organism:
Cellulophaga fucicola
NCBI taxonomy Id: 76595
Other names: ATCC 700863, C. fucicola, CIP 106308, DSM 24786, JCM 21778, LMG 18536, LMG:18536, strain NN015860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.