STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW63289.1Hypothetical protein. (420 aa)    
Predicted Functional Partners:
SFW63227.1
Hypothetical protein.
 
     0.825
SFW63271.1
Hypothetical protein.
 
     0.809
SFW63280.1
Hypothetical protein.
       0.773
SFW27098.1
Beta-barrel assembly machine subunit BamD.
  
 
 0.705
SFW63295.1
N-acetylmuramoyl-L-alanine amidase.
       0.689
SFW63253.1
Protein of unknown function, DUF547.
 
     0.688
SFW28872.1
Conserved repeat domain-containing protein.
  
     0.641
SFW63261.1
Hypothetical protein.
       0.638
SFW26707.1
Hypothetical protein.
   
   0.631
SFW37056.1
Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat.
   
   0.631
Your Current Organism:
Cellulophaga fucicola
NCBI taxonomy Id: 76595
Other names: ATCC 700863, C. fucicola, CIP 106308, DSM 24786, JCM 21778, LMG 18536, LMG:18536, strain NN015860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.