STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW63813.1Starch-binding associating with outer membrane. (570 aa)    
Predicted Functional Partners:
SFW63825.1
TonB-linked outer membrane protein, SusC/RagA family.
     0.942
SFW47290.1
TonB-linked outer membrane protein, SusC/RagA family.
 
 
   0.760
SFW55266.1
Starch-binding associating with outer membrane.
  
 
   0.758
SFW59529.1
TonB-linked outer membrane protein, SusC/RagA family.
 
 
   0.757
SFW48805.1
Starch-binding associating with outer membrane.
  
 
   0.742
SFW55278.1
TonB-linked outer membrane protein, SusC/RagA family.
  
 
   0.705
SFW63780.1
Beta-glucosidase.
 
  
  0.651
SFW37516.1
TonB-linked outer membrane protein, SusC/RagA family.
 
 
   0.640
SFW48816.1
TonB-linked outer membrane protein, SusC/RagA family.
  
     0.622
SFW45276.1
Protein of unknown function.
  
     0.571
Your Current Organism:
Cellulophaga fucicola
NCBI taxonomy Id: 76595
Other names: ATCC 700863, C. fucicola, CIP 106308, DSM 24786, JCM 21778, LMG 18536, LMG:18536, strain NN015860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.