STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW66164.1Altronate hydrolase. (550 aa)    
Predicted Functional Partners:
SFW66153.1
Tagaturonate reductase.
 
 0.998
SFW36947.1
2-dehydro-3-deoxygluconokinase.
 
 
 0.962
SFW66064.1
2-deoxy-D-gluconate 3-dehydrogenase.
  
  
  0.954
SFW20684.1
Mannitol 2-dehydrogenase.
 
 0.901
SFW66142.1
L-fuconolactonase.
 
   
 0.900
SFW66135.1
L-fucose dehydrogenase.
 
  
  0.880
SFW66174.1
2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
 
     0.880
SFW56021.1
Ribose 5-phosphate isomerase B.
     
 0.836
SFW66116.1
L-rhamnose mutarotase.
 
   
 0.754
SFW47044.1
D-galactarolactone cycloisomerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
  
 0.555
Your Current Organism:
Cellulophaga fucicola
NCBI taxonomy Id: 76595
Other names: ATCC 700863, C. fucicola, CIP 106308, DSM 24786, JCM 21778, LMG 18536, LMG:18536, strain NN015860
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