STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW66930.1Starch-binding associating with outer membrane. (600 aa)    
Predicted Functional Partners:
SFW66938.1
TonB-linked outer membrane protein, SusC/RagA family.
 
     0.937
SFW66892.1
Protein of unknown function.
 
 
   0.870
SFW24471.1
TonB-linked outer membrane protein, SusC/RagA family.
  
     0.774
SFW24457.1
Hypothetical protein.
  
     0.770
SFW66827.1
Glycosyl hydrolases family 16.
  
     0.762
SFW66235.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
  
     0.760
SFW66836.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
  
     0.760
SFW66922.1
Repeat-containing protein.
       0.757
SFW66735.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
  
     0.735
SFW39081.1
Glycosyl hydrolases family 16.
  
     0.730
Your Current Organism:
Cellulophaga fucicola
NCBI taxonomy Id: 76595
Other names: ATCC 700863, C. fucicola, CIP 106308, DSM 24786, JCM 21778, LMG 18536, LMG:18536, strain NN015860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.