STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW67794.1Alanine or glycine:cation symporter, AGCS family. (689 aa)    
Predicted Functional Partners:
SFW67786.1
Competence protein ComEA helix-hairpin-helix repeat region.
       0.796
SFW67777.1
Acyl-CoA dehydrogenase.
  
    0.773
SFW67800.1
Voltage-gated potassium channel.
       0.600
psd
Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
      0.566
SFW67806.1
Phage shock protein C (PspC) family protein.
       0.483
SFW64384.1
Na+/H+ antiporter NhaC.
 
  
 0.465
SFW48764.1
Chloride channel protein, CIC family.
  
    0.450
SFW67812.1
Protein of unknown function.
       0.431
Your Current Organism:
Cellulophaga fucicola
NCBI taxonomy Id: 76595
Other names: ATCC 700863, C. fucicola, CIP 106308, DSM 24786, JCM 21778, LMG 18536, LMG:18536, strain NN015860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.