Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
PUV_03460Putative uncharacterized protein. (1011 aa)    
Predicted Functional Partners:
spaC
Subtilin biosynthesis protein spaC.
 
   
 0.963
tycC
Tyrocidine synthase 3.
 
 
 
 0.690
yhiH
Uncharacterized ABC transporter ATP-binding protein YhiH.
  
  
 0.684
PUV_03440
Putative uncharacterized protein.
       0.642
aas
Bifunctional protein aas.
   
 
 0.611
glOD5
Glyoxalase domain-containing protein 5.
  
  
 0.558
PUV_21690
Putative uncharacterized protein.
  
  
 0.558
PUV_14550
Putative uncharacterized protein.
  
  
 0.546
PUV_03470
Unknown protein.
       0.543
ybhS
Inner membrane transport permease ybhS.
  
  
 0.538
Your Current Organism:
Parachlamydia acanthamoebae
NCBI taxonomy Id: 765952
Other names: P. acanthamoebae UV-7, Parachlamydia acanthamoebae UV-7, Parachlamydia acanthamoebae str. UV-7, Parachlamydia acanthamoebae strain UV-7, Parachlamydia sp. UV-7
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