Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
speABiosynthetic arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily. (623 aa)    
Predicted Functional Partners:
speB1
Agmatinase 1; Belongs to the arginase family.
 
 
 0.918
astA
Arginine N-succinyltransferase.
     
  0.900
PUV_04440
Putative uncharacterized protein.
       0.773
PUV_04470
Unknown protein.
       0.560
PUV_04480
Putative uncharacterized protein.
       0.546
PUV_04490
Putative uncharacterized protein.
       0.546
PUV_04430
Putative uncharacterized protein.
       0.512
PUV_04410
Putative uncharacterized protein.
       0.430
PUV_04420
Unknown protein.
       0.430
Your Current Organism:
Parachlamydia acanthamoebae
NCBI taxonomy Id: 765952
Other names: P. acanthamoebae UV-7, Parachlamydia acanthamoebae UV-7, Parachlamydia acanthamoebae str. UV-7, Parachlamydia acanthamoebae strain UV-7, Parachlamydia sp. UV-7
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